TY - JOUR
T1 - Polygenic prediction of bipolar disorder in a Latin American sample
AU - Cuellar-Barboza, Alfredo B.
AU - Prieto, Miguel L.
AU - Coombes, Brandon J.
AU - Gardea-Resendez, Manuel
AU - Núñez, Nicolás
AU - Winham, Stacey J.
AU - Romo-Nava, Francisco
AU - González, Sarai
AU - McElroy, Susan L.
AU - Frye, Mark A.
AU - Biernacka, Joanna M.
N1 - Publisher Copyright:
© 2023 Wiley Periodicals LLC.
PY - 2023
Y1 - 2023
N2 - To date, bipolar disorder (BD) genetic studies and polygenic risk scores (PRSs) for BD are based primarily on populations of European descent (EUR) and lack representation from other ancestries including Latin American (LAT). Here, we describe a new LAT cohort from the Mayo Clinic Bipolar Biobank (MCBB), a multisite collaboration with recruitment sites in the United States (EUR; 1,443 cases and 777 controls) and Mexico and Chile (LAT; 211 cases and 161 controls) and use the sample to explore the performance of a BD-PRS in a LAT population. Using results from the largest genome-wide association study of BD in EUR individuals, PRSice2 and LDpred2 were used to compute BD-PRSs in the LAT and EUR samples from the MCBB. PRSs explained up to 1.4% (PRSice) and 4% (LDpred2) of the phenotypic variance on the liability scale in the LAT sample compared to 3.8% (PRSice2) and 3.4% (LDpred2) in the EUR samples. Future larger studies should further explore the differential performance of different PRS approaches across ancestries. International multisite studies, such as this one, have the potential to address diversity-related limitations of prior genomic studies and ultimately contribute to the reduction of health disparities.
AB - To date, bipolar disorder (BD) genetic studies and polygenic risk scores (PRSs) for BD are based primarily on populations of European descent (EUR) and lack representation from other ancestries including Latin American (LAT). Here, we describe a new LAT cohort from the Mayo Clinic Bipolar Biobank (MCBB), a multisite collaboration with recruitment sites in the United States (EUR; 1,443 cases and 777 controls) and Mexico and Chile (LAT; 211 cases and 161 controls) and use the sample to explore the performance of a BD-PRS in a LAT population. Using results from the largest genome-wide association study of BD in EUR individuals, PRSice2 and LDpred2 were used to compute BD-PRSs in the LAT and EUR samples from the MCBB. PRSs explained up to 1.4% (PRSice) and 4% (LDpred2) of the phenotypic variance on the liability scale in the LAT sample compared to 3.8% (PRSice2) and 3.4% (LDpred2) in the EUR samples. Future larger studies should further explore the differential performance of different PRS approaches across ancestries. International multisite studies, such as this one, have the potential to address diversity-related limitations of prior genomic studies and ultimately contribute to the reduction of health disparities.
KW - Latin American
KW - bipolar disorder
KW - diversity
KW - polygenic risk score
UR - http://www.scopus.com/inward/record.url?scp=85150735379&partnerID=8YFLogxK
UR - https://www.mendeley.com/catalogue/b572c3f0-bd66-3678-821f-56328a7b5580/
U2 - 10.1002/ajmg.b.32936
DO - 10.1002/ajmg.b.32936
M3 - Article
C2 - 36919637
AN - SCOPUS:85150735379
SN - 1552-4841
VL - 192
SP - 139
EP - 146
JO - American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics
JF - American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics
IS - 7-8
ER -